By Sebastian Bassi

Programming wisdom is usually important for locating an answer to a organic challenge. in keeping with the author’s event operating for an agricultural biotechnology company, Python for Bioinformatics is helping scientists remedy their organic difficulties by way of supporting them comprehend the fundamentals of programming. Requiring no earlier wisdom of programming-related suggestions, the booklet makes a speciality of the easy-to-use, but strong, Python computing device language.



The publication starts with a really easy advent that teaches the foundations of programming. It then introduces the Biopython package deal, which are necessary in fixing existence technological know-how difficulties. the following part covers subtle instruments for bioinformatics, together with relational database administration structures and XML. The final half illustrates purposes with resource code, equivalent to series manipulation, filtering vector infection, calculating DNA melting temperature, parsing a genbank dossier, inferring splicing websites, and extra. The appendices supply a wealth of supplementary info, together with directions for fitting Python and Biopython and a Python language and magnificence guide.



By incorporating examples in biology in addition to code fragments all through, the writer locations a distinct emphasis on perform, encouraging readers to scan with the code. He exhibits tips on how to use Python and the Biopython package deal for development internet functions, genomic annotation, information manipulation, and numerous different applications.

Show description

Read Online or Download Python for Bioinformatics (Chapman & Hall/CRC Mathematical and Computational Biology) PDF

Best biotechnology books

Angiogenesis: In Vivo Systems, Part B (Methods in Enzymology)

Knowing how angiogenesis "works" and the way to manage it is going to have giant implications at the administration, remedies, and eventually the prevention of many universal (and no longer so universal) ailments. Angiogenesis is the expansion of recent blood vessels and is a crucial usual approach within the physique. A fit physique keeps an ideal stability of angiogenesis modulators.

Engineered Carbohydrate-Based Materials for Biomedical Applications: Polymers, Surfaces, Dendrimers, Nanoparticles, and Hydrogels

This e-book addresses the necessity for a complete publication at the layout, synthesis, and characterization of artificial carbohydrate-based polymeric fabrics besides their organic purposes. the 1st chapters hide the synthesis and self-assembly of glycopolymers and varied thoughts for growing those artificial polymers.

Thin Calcium Phosphate Coatings for Medical Implants

This publication offers for the 1st time, the scattered novel effects which were accomplished in very fresh years in learn on numerous skinny calcium phosphate coatings produced by way of very different suggestions. The comparability of skinny calcium phosphate coatings with the thick plasma-sprayed ones can also be incorporated within the publication.

The Molecular Biology and Biochemistry of Fruit Ripening

A accomplished and mechanistic viewpoint on fruit ripening, emphasizing commonalities and alterations among fruit teams and ripening techniques. culmination are a necessary a part of the human vitamin and comprise very important phytochemicals that supply safety opposed to middle illness and cancers. Fruit ripening is of importance for human wellbeing and fitness and for industry-based techniques to harness average edition, or genetic amendment, for crop development.

Extra resources for Python for Bioinformatics (Chapman & Hall/CRC Mathematical and Computational Biology)

Example text

Download PDF sample

Rated 4.33 of 5 – based on 36 votes